2007

2006

2005

Friedman, L., Zhao, Q, Cheng, H., Duensing R., Greve, D.N., Glover, G.H., A. Functional BIRN Consortium (2005): Multi-center fMRI Calibration with SMARTPHANTOM. 13th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM), Miami Beach, FL.

Friedman, L., Krenz, D., Magnotta, V., Functional BIRN (2005): Isolated Spike-Like Transients (ISLTs) in Functional MR Timeseries: Evidence for Vendor and Field Strength Effects on Rates. 13th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM), Miami Beach, FL.

Friedman, L., Krenz, D.E., FIRST BIRN. (2005). Scanner and Field Strength Effects on the Shape of the Hemodynamic Response Function. Annual Meeting of the Organization for Human Brain Mapping, Toronto, Ontario, Canada, June 12-16th, 2005.

Friedman, L., Zhao, Q., Cheng, H., Duensing, R., Greve, D., Glover, G. (2005). Multi-center fMRI Calibration with SMARTPHANTOM: Preliminary Studies. Annual Meeting of the Organization for Human Brain Mapping, Toronto, Ontario, Canada, June 12-16th, 2005.

Friedman, L., Krenz, D.E., FIRST BIRN. (2005). Field-Strength and Vendor Effects on the Degree of Temporal Autocorrelation in fMRI Timeseries. Annual Meeting of the Organization for Human Brain Mapping, Toronto, Ontario, Canada, June 12-16th, 2005.

Friedman, L., Krenz, D.E., Magnotta, V.A., FIRST BIRN. (2005). Isolated Spike-like Transients (ISLTs) in Functional MR Timeseries: Evidence for Vendor and Field Strength Effects on Rates. Annual Meeting of the Organization for Human Brain Mapping, Toronto, Ontario, Canada, June 12-16th, 2005.

Kemp, A. S., Turner, J. A., Lee, H. J., Trondsen, L. C., Gooch, K. N., Mirski, D., Potkin, S. G., FIRST BIRN. (2005). The Neurocognitive Correlates of BOLD Activation in the Dorsolateral Prefrontal Cortex of Patients with Schizophrenia: An fMRI Investigation. International Congress of Schizophrenia Research, Savannah GA.

Turner, J., Potkin, S. G., Brown, G. G., Glover, G. H., Fallon, J. H., McCarthy, G., Lim, K. O., Gollub, R. L., Rosen, B. R., Toga, A. W., Kikinis, R., Pieper, S., Dale, A. M., Lauriello, J.. O'Leary, D. S., Lieberman, J. A., Belger, A., Greve, D. N., Friedman, L., Cannon, T. D., Keator, D. B., Grethe, J. S., Function BIRN. (2005) . Multi-Center fMRI Methods And Design: Function BIRN. International Congress of Schizophrenia Research, Savannah GA.

Potkin SG, Bunney WE, Dale A, Rosen B, Toga A, Multiple Problems with Multi-Site Brain Imaging Studies, Abstract and poster presentation at the Winter Conference on Brain Research, Breckenridge, CO, January 2005.

2004

Brown, G, Pieper SD, Martone, M, Aucoin, N, Joyner, A, Bischoff-Grethe, A, Torvik, V, FIRST BIRN. (2004). The Query Atlas: A Brain Referenced Knowledge Discovery Tool. Annual Meeting of the Society for Neuroscience, San Diego, California.

Foland, LC, Thomason, ME, FIRST BIRN, Glover, GH. (2004). Calibrating Functional MRI Data Across Subjects And Scan Sites. Annual Meeting of the Society for Neuroscience, San Diego, California.

Friedman L, FIRST BIRN. (2004). An Index of Scanner/Site Differences in fMRI Sensitivity: Method and Implications. 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM),Kyoto, Japan.

Friedman L, Magnotta VA, Posse S, FIRST BIRN. (2004). Scanner differences in the Smoothness of fMRI Images: Implications for Multi-Center Studies. 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM), Kyoto, Japan.

Friedman, L, Posse, S, FIRST BIRN. (2004). Insights into Multi-Site FMRI Repeatability: Scanner Differences in Sensitivity and Smoothness. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Gadde, S, Michelich, CR, Voyvodic, J. (2004). An XML-based Data Access Interface for Image Analysis and Visualization Software. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Greve, DN, White, NS, Dale, AM, FIRST-BIRN. (2004). Evaluation of fMRI Sensitivity Across Multiple Sites. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Glover, GH, Foland, L, FIRST BIRN. (2004). Scanner Quality Assurance for Longitudinal or Multicenter fMRI Studies. 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM),Kyoto, Japan.

Glover, GH, Thomason, ME, Foland, L, FIRST BIRN. (2004). Calibration of fMRI Activation for the FIRST BIRN Project. 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM),Kyoto, Japan.

Keator, DB, Gadde, S, Grethe, JS, Taylor, DV, Potkin, SG, FIRST BIRN. (2004). A General XML Schema And Associated SPM Toolbox For Storage And Retrieval Of Neuro-Imaging Results And Anatomical Labels. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Keator, DB; Gadde, S, Grethe, JS, Taylor, DV, Potkin, SG, FIRST BIRN. (2004). A General XML Schema and Associated SPM Toolbox for Storage and Retrieval of Neuro-Imaging Results and Anatomical Labels. Human Brain Project Neuro-Informatics meeting, Bethesda, MD.

Magnotta, VA, Friedman, L, FIRST BIRN. (2004). SNR and CNR Measurements in the fBIRN Multicenter Study. 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM),Kyoto, Japan.

Morris, SK, Brown G.G., Glover G.H., Foland L.C, Bischoff-Grethe A, Liu T, Ozyurt BI, Turner T, FIRST BIRN. (2004). The Stability Of Sensory Motor Activation In fMRI Across Sites: Initial Calibrations. Annual Meeting of the Society for Neuroscience, San Diego, California.

Ozyurt, BI, Wei, D, Keator, DB, Potkin, SG, Brown, GG, Grethe, JS. (2004).Web-Accessible Clinical Data Management Within An Extensible Neuroimaging Database. Annual Meeting of the Society for Neuroscience, San Diego, California.

Ozyurt IB, Brown GG, Grethe JS, Morphometry BIRN, FIRST BIRN (2004). A general, extensible system for human brain imaging data retrieval and maintenance. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Ozyurt, BI; Wei, D; Keator, DB; Potkin, SG ; Brown GG; Grethe, JS, Morphometry BIRN; Function BIRN; BIRN Coordinating Center (http://www.nbirn.net). (2004). A user-friendly, web-accessible system for the management, discovery, retrieval, and analysis of clinical and brain imaging data. Human Brain Project Neuro-Informatics meeting, Bethesda, MD.

Potkin., SG, GG Brown, GH Glover, G McCarthy, KO Lim, R Gollub, B Rosen, A Toga, R Kikinis, A Dale, J Lauriello, D O'Leary, J Lieberman, A Belger, D Greve, L Friedman, T Cannon, DB Keator, JS Grethe, JA Turner, Function BIRN. (2004). Functional Biomedical Informatics Research Network: Multi-Center FMRI Methods. American College of Neuropsychopharmacology Meeting, San Juan, Puerto Rico.

Stern, HS; Kim, S-Y; Smyth, PJ, FIRST BIRN. (2004). A variance components analysis of a multi-site fMRI study. Joint Statistical Meetings in Toronto, Ontario, Canada.

Stern, HS; Kim, S-Y; Smyth, PJ, van Dyk, D.; FIRST BIRN. (2004). A Variance Components Analysis of a Multi-Site fMRI Study. Annual Meeting of the International Society for Bayesian Analysis, Vina del Mar, Chile.

Turner JA, Lee HJ, Wible C, McCarthy G, Potkin SG, FIRST BIRN. (2004). The stability of auditory activation in functional magnetic resonance imaging data across sessions and sites. Annual Meeting of the Cognitive Neuroscience Society, San Francisco, CA.

Turner, JA, Potkin, SG, Glover, G, McCarthy, G, Gollub, RL, Brown, G, Dale, A, Grethe, JS, Friedman, L, Keator, DB, FIRST BIRN. (2004). Biomedical Informatics Research Network: Functional Imaging Research In Schizophrenia Testbed. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Turner, JA, Morris, SK, Lee, HJ, Wible, C, Brown, GG, Potkin, SG, FIRST BIRN. (2004). The stability of auditory activation in fMRI across sessions and sites: Initial Calibrations. Annual Meeting of the Society for Neuroscience, San Diego, California.

Zou, KH, Greve, DN, Wang, M, Pieper, SD Warfield, SK, White, NS, Vangel, MG, Kikinis, R, Wells, WM, FIRST BIRN. (2004). A Prospective Multi-Institutional Study of the Reproducibility of fMRI: A Preliminary Report from the Biomedical Informatics Research Network. Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary.

Zou, KH Zou, Wang, M, Pieper, SD, Kikinis, R Kikinis, Wells, WM III, FIRST BIRN. (2004). Factors Impacting the Reproducibility of Functional MR Imaging: A Prospective Multi-Institutional Study by the Biomedical Informatics Research Network (BIRN). 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM),Kyoto, Japan.

Zou KH, Pieper SD, Wang M, Warfield SK, Wells WM, III, Kikinis R, FIRST BIRN. (2004). An expectation-maximization algorithm for analyzing multi-center repeated functional magnetic resonance imaging (fMRI) data. Joint Statistical Meetings in Toronto, Ontario, Canada.

2007

Brown GG. (2007) Functional magnetic resonance imaging in clinical practice: look before you leap. Neuropsychol Rev. Jun;17(2):103-6.

Brown GG, Clark C, Liu TT. (2007) Measurement of cerebral perfusion with arterial spin labeling: Part 2. Applications. J Int Neuropsychol Soc. May;13(3):526-38.

Brown GG, Perthen JE, Liu TT, Buxton RB. (2007) A primer on functional magnetic resonance imaging. Neuropsychol Rev. Jun;17(2):107-25.

Friedman, L., Stern, H., Brown, G.G., Mathalon, D., Turner, J.A., Glover, G.H., Gollub, R.L., Lauriello, J., Lim, K.O., Cannon, T., Greve, D.N., Bockholt, H.J., Belger, A., Mueller, B., Doty, M.J., He, J., Wells, W., Smyth, P.J., Pieper, S., Kim, S., Kubicki, M., Morris, S., Vangel, M., Potkin, S.G. (2007). Test-Retest and Between-Site Reliability in a Multicenter fMRI Study. Hum Brain Mapp. 2007 Jul 17; [Epub ahead of print]

Keator, D.B.; Grethe, J.S.; Marcus, D.; Ozyurt, B.; Gadde, S.; Murphy, S.; Pieper, S.; Greve, D.;Notestine, R.; Bockholt, H.J.; Papadopoulos, P.; Function BIRN; Morphometry BIRN; BIRN Coordinating Center. (2007). A National Human Neuroimaging Collaboratory Enabled By The Biomedical Informatics Research Network (BIRN). In Press to IEEE Transactions on Information Technology in Biomedicine, Special Bio-Grid edition.

Kim, S. and P. Smyth, Hierarchical Dirichlet processes with random effects, in Advances in Neural Information Processing Systems 19, B. Scholkopf, J. Platt, T. Hoffman (eds.), MIT Press: Cambridge, MA, 2007, pp.697-704.

Liu TT, Brown GG. (2007) Measurement of cerebral perfusion with arterial spin labeling: Part 1. Methods. J Int Neuropsychol Soc. May;13(3):517-25. Review.

Petrovic, V., Fallon, J., and Kuester, F. (2007). Visualizing whole-brain DTI tractography with gpu-based tuboids and lod management. IEEE Transactions on Visualization and Computer Graphics (TVCG), Special Issue for IEEE Visualization 2007. In Press.

Thomason, M.E., Foland, L.C, and Glover, G.H. (2007) Calibration of BOLD fMRI using breath-holding reduces group variance during a cognitive task. Human Brain Mapping, in press.

Turner, J.A., Potkin, S.G., Brown, G.G., Keator, D.B., McCarthy, G., Glover, G.H. (2007). Neuroimaging for the diagnosis and study of mental disorders. IEEE Signal Processing Magazine, 24(4), 112-11.

2006

Brown GG and LT Eyler (2006) Methodological and conceptual issues in functional magnetic resonance imaging: Applications to Schizophrenia Research. Annual Review of Clinical Psychology Vol. 2: 51-81.

Friedman, L., and Glover, G.H. (2006). Report on a Multicenter fMRI Quality Assurance Protocol. J Magn Reson Imaging 23(6):827-839.

Friedman L., Glover GH, FIRST BIRN. (2006). Reducing Scanner-to-Scanner Variability of Activation in a Multi-center fMRI Study: Controlling for Signal-to-Fluctuation-Noise-Ratio (SFNR) Differences. Neuroimage. 2006 Nov 1;33(2):471-81.

Friedman L., Glover GH, Krenz D, Magnotta V. FIRST BIRN: Reducing Scanner-to-Scanner Variability of Activation in a Multi-center fMRI Study: Role of Smoothness Equalization. Neuroimage. 2006 Oct 1;32(4):1656-68

Keator, D; Gadde, S; Grethe, J ; Taylor, D; FIRST BIRN; Potkin, S. A. (2006). General XML Schema and Associated SPM Toolbox for Storage and Retrieval of Neuro-Imaging Results and Anatomical Labels. Neuroinformatics, 4(2):199-212.

Kim, S. Smyth, P., Stern, H., Turner, J., FIRST BIRN. (2005) Parametric response surface models for analysis of multi-site fMRI data. Proceedings of the 8th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI). Lecture Notes in Computer Science, Springer-Verlag, Berlin Heidelberg New York, 3749, 352-359.

Lee, C. P., Dourish, P., and Mark, G. 2006. The human infrastructure of cyberinfrastructure. In: Proceedings of the 2006 20th Anniversary Conference on Computer Supported Cooperative Work (Banff, Alberta, Canada, November 04 - 08, 2006). CSCW '06. ACM Press, New York, NY, p. 483-492.

Magnotta, V.A., Friedman, L., FIRST BIRN. (2006). Measurement of signal-to-noise and contrast-to-noise in the FBIRN multi-center imaging study. Journal of Digital Imaging, in press.

Turner, J., Smyth, P., Fallon, J.F., Kennedy, J.L., Potkin, S.G., FIRST BIRN (2006). Imaging and genetics in schizophrenia. Neuroinformatics, 4(1):21-49.

2005

Cosman E, Wells WM. (2005). Bayesian Population Modeling of Effective Connectivity. Proceedings of Image Processing in Medical Imaging (IPMI), 3565, Jul 2005, pp 39-51.

Lee, HJ, Turner, J., Potkin, SG., FIRST BIRN. (2005) Calibration Method of Functional Magnetic Resonance Images. Proceedings of the 2005 International Conference Imaging Science, Systems, and Technology: Computer Graphics (CISST'05), Las Vegas June 27-30 2005, pp 13-19.

Zou KH, Greve DN, Wang M, Pieper SD, Warfield SK, White NS, Manandhar S, Brown GG, Vangel MG, Kikinis R, Wells WM, For the FIRST BIRN Research Group. Reproducibility of functional MR imaging: preliminary results of Prospective multi-institutional study performed by Biomedical Informatics Research Network. Radiology 2005; 237: 781-789.

2004

Cosman E, Fisher J, Wells W (2004) "Exact MAP activity detection in fMRI using a GLM with an Ising spatial prior." Medical Image Computing and Computer-Assisted Intervention, St. Malot, France; published in Lecture Notes in Computer Science., 3217, 703-710

Lee HJ, Turner JA, Potkin SG (2004) "Scalable parallel reconstruction algorithm for magnetic resonance images." Proceedings of the 2004 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA ‘04), Las Vegas, NV, Vol. 1, 73-79. 2004.

Lee HJ, Turner JA, FIRST BIRN (2004) "Parallel reconstruction algorithms for MRIs." Proceedings of the 3rd International Conference on Computer and Information Science (ICIS ‘04), Los Angeles, CA, Vol. 1, 55-62. 2004.

Lee HJ, Potkin SG (2004) "Fine-grain parallel reconstruction algorithm for MR images." Proceedings of the 17th International Conference on Parallel and Distributed Computing Systems (PDCS ‘04), San Francisco, CA, Vol. 1, 383-389. 2004. (PDF)

Lee HJ, Potkin SG, Lee S (2004) "Intelligent Reconstruction Method of MR Images." Proceedings of 2004 International Symposium on Intelligent Signal Processing and Communication Systems, Seoul Korea, 365-369. November 2004.

Lee HJ, Turner JA, FIRST BIRN (2004) "Task Distribution Methods for the Reconstruction of MR Images." Proceedings of the 5th International Conference on Parallel and Distributed Computing, Applications and Technologies, Singapore, 257-266. December 2004.

2003

Potkin SG, Andreasen N, Brown G, Glover G, Kikinis R, Lauriello J, Lieberman J, Lim K, McCarley R, McCarthy G, Rosen B, Toga A. (2002). Multi-site brain fMRI imaging studies in schizophrenia using the BIRN methodology and federated database approach. ACNP 41st Annual Meeting, San Juan, Puerto Rico, 252-253.

Potkin SG, Andreasen N, Belger A, Brown G, Ford J, Glover G, Golub R, Heckers S, Lauriello J, Lieberman J, Lim KO, McCarley R, McCarthy G, Rosen B, Toga A, Turner J, Wible C. (2003). Workshop on Multi-Site Brain FMRI Imaging Studies in Schizophrenia Using the BIRN Methodology: Cognitive Tasks and Clinical Correlates. International Congress on Schizophrenia Research Annual Meeting, Denver, CO.

Potkin, SG; Turner, JA; Brown, GG; Glover, GH; Heckers, S; Keator, DB; Grethe, JS; FIRST BIRN. (2003). Biomedical Informatics Research Network: Functional Imaging Research in Schizophrenia Testbed. Annual Meeting of the Society for Neuroscience, New Orleans, LA.

Turner, JA; Potkin, SG; Brown, GG;Glover, GH; Greve, D; Keator, DB; McCarthy, G; Grethe, JS; Wible, CG; Lim, K; Toga, AW; Andreasen, NC; O'Leary, D; FIRST BIRN. (2003). Biomedical Informatics Research Network: Integrating multi-site human functional imaging acquisition and analysis. Biomedical Information Science and Technology Initiative (BISTI) Symposium, Bethesda, MD.

2007

Bockholt, HJ, Turner, JA, Johnson, HJ, Calhoun, VD, Greve, DN, Williams, S., Van Erp, TG., O'Leary, D., Lauriello, J., Wible, CG, Lim, KO, Mueller, BA, Brown, GG, Voyvodic, J., McCarthy, G., Ford, JM, Potkin, SG, FBIRN. (2007). Morphometric analysis of a multi-site study of schizophrenia using Freesurfer.

Ford, JM, Mathalon, DH, Roach, BJ, Turner, JA, Potkin, SG, Brown, GG, Wible, CG, McCarthy, G, Greve, DN, Mueller, BA, Keator, DB, Lim, KO, O'Leary, D, Belger, A, Voyvodic, J, Glover, GH, Lauriello, J, FBIRN. (2007). Hallucinations and deviant tones compete for primary auditory cortical resources: Multi-site fMRI study of schizophrenia.

Friedman, L, Mathalon, DH, Ford, JM, Elliott, T, Greve, DN, Mueller, B, Liu, T, Turner, JA, Cox, RW, Glover, GH. (2007). Are Multichannel Coils as Helpful as We Think for EPI-BOLD Data at 3.0T? Annual Meeting of the Organization for Human Brain Mapping, Chicago, IL.

Friedman, L; Trondsen, L, Turner, J, Glover, G, Potkin, S. (2007) The Effects of Chronic Smoking on BOLD Effects of the Breath Hold Task: Implications for Breath Hold Calibration Procedures. Annual Meeting of the Organization for Human Brain Mapping, Chicago, IL.

Potkin, S.G., Turner, J.A., Lee, H., Brown, G.G., Bischoff-Grethe, A., Greve, D.N., McCarthy, G., Ford, J., Mathalon, D.H., Lim, K.O., Mueller, B.A., Voyvodic, J., Belger, A., Toga, A., Wible, C.G., Lauriello, J. Glover, G.H., FBIRN. (2007). A multi-site fMRI study of working memory in schizophrenia: an FBIRN report.

Turner, J.A., Gooch, K.N., Nguyen, T.Q., Trondsen, L.C., Bunney, W.E., Potkin, S.G., and FBIRN. Morphometric group analysis exploration of schizophrenic versus controls yields sensory region atrophy. International Congress on Schizophrenia Research, Colorado Springs, CO.

Turner, J.A., Tura, E., Trondsen, L.C., Lee, H.J., Potkin, S.G., FBIRN. (2007). Functional circuitries in healthy subjects and schizophrenic patients during a working memory task.

Van Erp, T.G., Segall, J., Bockholt, H.J., Turner, J.A., Johnson, H.J., Greve, D.N., Mueller, B.A., Lim, K.O., Wible, C.G., Lauriello, J., O'Leary, D., Brown, G.g., Voyvodic, J., McCarthy, G., Ford., J., Belger, A., Potkin, S.G., Calhoun, V.D., FBIRN. (2007). Voxel-based morphometric analysis of a multi-site study on schizophrenia.

2006

Friedman, Lee; Glover, Gary, FBIRN. Reducing Scanner-to-Scanner Variation of Activation in Multi-Center fMRI Studies: Adjustment for Signal-to-Fluctuation-Noise-Ratio. Organization for Human Brain Mapping Annual Meeting, Florence IT 2006.

Goland, Polina. Anatomically-Guided MRF Spatial Regularization Model for fMRI Detection. (Using FBIRN Phase I data). Organization for Human Brain Mapping Annual Meeting, Florence IT 2006.

A. Gupta, C. Bean, W. Bug, C. Fennema-Notestine, M. E. Martone, J. A. Turner, J. S.Grethe. (2006). Creating a community-based knowledge management framework for integrating neuroscience data via ontologies. Annual Meeting of the Society for Neuroscience, Atlanta, GA.

Keator, D.B.; Grethe, J.; Ozyurt, B.; Gadde, S.; Wei, D.; Turner, J.A.; Potkin, S.G.; Brown, G.G.; McCarthy,G.; Glover, G.; Stern, H.; Lauriello, J.; Friedman, L.; Belger, A.; Lim, K.O.; Pieper, S.; Greve,D.; F.BIRN. . Function Biomedical Informatics Research Network Open Source FMRI Informatics, Calibration, and Data Tools Repository. Organization for Human Brain Mapping Annual Meeting, Florence IT 2006.

Keator, D.B.; Ozyurt, B.; Wei, D.; Gadde, S.; Potkin, S.G.; Brown,G.; Morphometry BIRN, FIRST BIRN, Grethe, J. A General and Extensible Multi-Site Database and XML based Informatics System for the Storage, Retrieval, Transport and Maintenance of Human Brain Imaging and Clinical Data. Organization for Human Brain Mapping Annual Meeting, Florence IT 2006.

Potkin SG, JA Turner, GG Brown, HS Stern, GH Glover, G McCarthy, D Greve, L Friedman, DB Keator, JS Grethe, JH Fallon, KO Lim, RL Gollub, BR Rosen, AW Toga R Kikinis, J Lauriello, DS O'leary, A Belger, FBIRN  2006.   Multicenter fMRI methods and design: function BIRN.  Society for Neuroscience Conference, Atlanta, Oct 14, 2006.

J. A. Turner, C. Fennema-Notestine, M. E. Martone, A. R. Laird, J. S. Grethe, W. Bug, A. Gupta, C. Bean. (2006) You say potato, I say potahto: Ontological engineering applied within the Biomedical Informatics Research Network. Annual Meeting of the Society for Neuroscience, Atlanta, GA.

Turner, J.; Potkin, S. G.; Brown, G. G.; Stern, H. S; Glover, G. H.; McCarthy, G.; Greve, D. N.; Friedman, L.; Keator, D. B.; Grethe, J. S. Fallon, J. H.; Lim, K. O.; Gollub, R. L.; Rosen, B. R.; Toga, A. W.; Kikinis, R.; Pieper, S.; Lauriello, J.; O'Leary, D. S.; Belger, A.; Function BIRN. (2006). Multi-center fMRI methods and design: Function BIRN. Annual Meeting of the Society for Neuroscience, Atlanta, GA.

Turner, Jessica, Hal Stern, Lee Friedman, Greg Brown, Doug Greve, Gary Glover, Cindy Wible, Steven Potkin, FBIRN. Variance reduction in multi-site functional imaging. Organization for Human Brain Mapping Annual Meeting, Florence IT 2006.

Turner, J.A. (2006). Calibration strategies to improve data comparability. Optimizing fMRI approaches to Adolescent Mental Disorders, NIMH Workshop, August 17-18, 2006

Yendiki, Anastasia; Wallace, Stuart; Vangel, Mark; Clark, Vince; Lim, Kelvin; Andreasen, Nancy; Greve, Doug; Manoach, Dara S.; Gollub,Randy L. Multi-site characterization of an fMRI working memory paradigm: reliability of activation indices. Organization for Human Brain Mapping Annual Meeting, Florence IT 2006.

2005

Friedman L, Krenz D, FIRST BIRN (2005) "Field-Strength and Scanner Vendor Effects on the Degree of Temporal Autocorrelation in fMRI Timeseries." In: 11th Annual OHBM Meeting. Toronto, Ontario, Canada. (PDF)

Friedman L, Krenz D, Magnotta V, FIRST BIRN (2005) Isolated Spike-like Transients (ISLTs) in Functional MR Timeseries: Evidence for Vendor and Field Strength Effects on Rates. In: 11th Annual OHBM Meeting. Toronto, Ontario, Canada. (PDF Poster, PDF Abstract)

Friedman, L., Krenz, D., Magnotta, V., Functional BIRN (2005): Isolated Spike-Like Transients (ISLTs) in Functional MR Timeseries: Evidence for Vendor and Field Strength Effects on Rates. 13th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM), Miami Beach, FL.

Friedman L, Krenz D, FIRST BIRN (2005) Scanner and Field-Strength Effects on the Shape of the Hemodynamic Response Function. In: 11th Annual OHBM Meeting. Toronto, Ontario, Canada. (PDF)

Friedman, L., Zhao, Q, Cheng, H., Duensing R., Greve, D.N., Glover, G.H., A. Functional BIRN Consortium (2005): Multi-center fMRI Calibration with SMARTPHANTOM. 13th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM), Miami Beach, FL.

Friedman, L., Zhao, Q., Cheng, H., Duensing, R., Greve, D., Glover, G. (2005). Multi-center fMRI Calibration with SMARTPHANTOM: Preliminary Studies. Annual Meeting of the Organization for Human Brain Mapping, Toronto, Ontario, Canada, June 12-16th, 2005.

Glover, Gary. (2005). Variability of Images Across Sites and Machines: the Biomedical Informatics Network (BIRN) Experience. NIfTI Neuroimaging Seminar, NIH, March 15, 2005.

Kemp AS, Turner JA, Lee HJ, Trondsen LC, Gooch KN, Mirski D, Potkin SG, FIRST BIRN (2005) The Neurocognitive Correlates of BOLD Activation in the Dorsolateral Prefrontal Cortex of Patients with Schizophrenia: An fMRI Investigation. In: International Congress of Schizophrenia Research. Savannah GA. (PDF)

Lee, HJ, Turner, J., Potkin, SG., FIRST BIRN. (2005) Calibration Method of Functional Magnetic Resonance Images. Proceedings of the 2005 International Conference Imaging Science, Systems, and Technology: Computer Graphics (CISST'05), Las Vegas June 27-30 2005, pp.13-19.

Potkin SG, Bunney WE, Dale A, Rosen B, Toga A, "Multiple Problems with Multi-Site Brain Imaging Studies", Abstract and poster presentation at the Winter Conference on Brain Research, Breckenridge, CO, January 2005.

Turner J (2005) "Multi-site fMRI calibration and combination." In: UCI Brain Map monthly presentation. University of California, Irvine. (PDF) (Powerpoint)

Turner J, Potkin SG, Brown GG, Glover GH, Fallon JH, McCarthy G, Lim KO, Gollub RL, Rosen BR, Toga AW, Kikinis R, Pieper S, Dale AM, Lauriello J, O'Leary DS, Lieberman JA, Belger A, Greve DN, Friedman L, Cannon TD, Keator DB, Grethe JS, Function BIRN. (2005) Multi-Center fMRI Methods And Design: Function BIRN. In: International Congress of Schizophrenia Research. Savannah GA. (PDF)

Zou KH, Greve DN, Wang M, Pieper SD, Warfield SK, White NS, Manandhar S, Brown GG, Vangel MG, Kikinis R, Wells WM, For the FIRST BIRN Research Group. (2005). Reproducibility of functional MR imaging: preliminary results of Prospective multi-institutional study performed by Biomedical Informatics Research Network. Radiology 237: 781-789.

2004

(2004) "Function BIRN All Hands Meeting 2004." In: FIRST BIRN. San Diego.

Brown GG, Pieper S, Martone M, Aucoin N, Joyner A, Bischoff-Grethe A, Torvik V (2004) The Query Atlas: A Brain Referenced Knowledge Discovery Tool.

Cosman ER, Fisher JW, Wells WM (2004) Exact MAP Activity Detection in fMRI using a GLM with an Ising Spatial Prior. In: MICCAI 2004 7th International Conference. Saint-Malo, France. (PDF)

Foland LC, Thomason ME, FIRST BIRN, Glover GH (2004) Calibrating Functional MRI Data Across Subjects And Scan Sites. In: Annual Meeting of the Society for Neuroscience. San Diego, California. (Poster PDF)

Friedman L, Posse S, FIRST BIRN (2004) "Insights into Multi-Site FMRI Repeatability: Scanner Differences in Sensitivity and Smoothness." Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. 2004. (PDF)

Friedman L, Magnotta VA, Posse S, FIRST BIRN (2004) Scanner differences in the Smoothness of fMRI Images: Implications for Multi-Center Studies. In: 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM). Kyoto, Japan.

Friedman L, Zhao Q, Cheng H, Duensing R, Greve DN, Glover GH, Functional BIRN Consortium (2004) Multi-center fMRI Calibration with SMARTPHANTOM. In. (PDF Abstract)

Gadde S, Michelich CR, Voyvodic J (2004) "An XML-based Data Access Interface for Image Analysis and Visualization Software." Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. 2004. (PDF Abstract)

Glover GH, Foland L, FIRST BIRN. (2004) "Scanner Quality Assurance for Longitudinal or Multicenter fMRI Studies". In: 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM). Kyoto, Japan. (Poster PDF)

Glover GH, Foland FC, FIRST BIRN. (2004) "Scanner Quality Assurance for Longitudinal or Multicenter fMRI Studies". In. Zurich, Switzerland. (Poster PDF)

Glover GH, Thomason ME, Foland L, FIRST BIRN (2004) Calibration of fMRI Activation for the FIRST BIRN Project. In: 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM). Kyoto, Japan.

Greve DN, White NS, Dale AM, FIRST-BIRN (2004) "Evaluation of fMRI Sensitivity Across Multiple Sites." Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. 2004. (PDF)

Keator DB, Gadde S, Grethe JS, Taylor DV, Potkin SG, FIRST BIRN (2004) "A General XML Schema And Associated SPM Toolbox For Storage And Retrieval Of Neuro-Imaging Results And Anatomical Labels. " Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. 2004. (Abstract PDF) (Poster PDF)

Keator DB, Gadde S, Grethe JS, Taylor DV, Potkin SG, FIRST BIRN (2004) "A General XML Schema and Associated SPM Toolbox for Storage and Retrieval of Neuro-Imaging Results and Anatomical Labels. " Human Brain Project Neuro-Informatics meeting, Bethesda, MD. 2004. (Poster PDF)

Lee, H.J., Turner, J.A., Potkin, S.G. (2004). Scalable parallel reconstruction algorithm for magnetic resonance images. Proceedings of the 2004 International Conference on Parallel and Distributed Processing Techniques and Applications(PDPTA '04), Las Vegas, NV, Vol. 1, 73-79.

Lee, H.J., Turner, J.A., FIRST BIRN. (2004). Parallel reconstruction algorithms for MRIs. Proceedings of the 3rd International Conference on Computer and Information Science(ICIS '04), Los Angeles, CA, Vol. 1, 55-62.

Lee, H.J., Potkin, S.G. (2004). Fine-grain parallel reconstruction algorithm for MR images. Proceedings of the 17th International Conference on Parallel and Distributed Computing Systems(PDCS '04), San Francisco, CA, Vol. 1, 383-389.

Lee, H.J., Potkin, S.G., Lee, S. (2004). Intelligent Reconstruction Method of MR Images. Proceedings of 2004 International Symposium on Intelligent Signal Processing and Communication Systems, November 2004, Seoul Korea, 365-369.

Lee, H.J., Turner, J.A., FIRST BIRN. (2004).Task Distribution Methods for the Reconstruction of MR Images. Proceedings of the 5th International Conference on Parallel and Distributed Computing, Applications and Technologies, December 2004, Singapore, 257-266.

Magnotta VA, Friedman L, FIRST BIRN (2004) SNR and CNR Measurements in the fBIRN Multicenter Study. In: 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM). Kyoto, Japan.

Morris SK, Brown GG, Glover GH, Foland LC, Bischoff-Grethe A, Liu T, Ozyurt BI, Turner T, FIRST BIRN (2004) The Stability Of Sensory Motor Activation In fMRI Across Sites: Initial Calibrations. In: Annual Meeting of the Society for Neuroscience. San Diego, California.

Ozyurt IB, Wei D, Keator DB, Potkin SG, Brown GG, Grethe JS, Morphometry BIRN; Function BIRN; BIRN Coordinating Center (2004) "A user-friendly, web-accessible system for the management, discovery, retrieval, and analysis of clinical and brain imaging data." Human Brain Project Neuro-Informatics meeting, Bethesda, MD. 2004. (Abstract PDF)

Ozyurt IB, Brown GG, Grethe JS, Morphometry BIRN, FIRST BIRN (2004) "A general, extensible system for human brain imaging data retrieval and maintenance." In: Human Brain Mapping. Budapest.

Ozyurt, B.I., Wei, D., Keator, D.B., Potkin, S.G., Brown, G.G., Grethe, J.S.. (2004).Web-Accessible Clinical Data Management Within An Extensible Neuroimaging Database. Annual Meeting of the Society for Neuroscience, San Diego, California.

Potkin SG, Brown GG, Glover GH, McCarthy G, Lim KO, Gollub R, Rosen B, Toga A, Kikinis R, Dale A, Lauriello J, O'Leary O, Lieberman J, Belger A, Greve D, Friedman L, Cannon T, Keator DB, Grethe JS, Turner JA, Function BIRN. (2004) Functional Biomedical Informatics Research Network: Multi-Center FMRI Methods. In: American College of Neuropsychopharmacology Meeting. San Juan, Puerto Rico. (PDF)

Potkin SG, Rosen B, Morphometry BIRN, FIRST BIRN (2004) "Data Sharing within the Biomedical Informatics Research Network:Experiences of the FIRST BIRN and Morphometry BIRN Testbeds." In: Functional Imaging Pediatrics. NIH 2004. (PDF)

Stern HS, Kim SY, Smyth PJ, van Dyk D, FIRST BIRN. (2004) A Variance Components Analysis of a Multi-Site fMRI Study. In: International Society for Bayesian Analysis meeting. Vina del Mar, Chile. (Presentation)

Stern HS, Kim SY, Smyth PJ, FIRST BIRN. (2004) A variance components analysis of a multi-site fMRI study. In: Joint Statistical Meetings. Toronto, Ontario, Canada.

Turner JA, Lee HJ, Wible C, McCarthy G, Potkin SG, FIRST BIRN (2004) "The stability of auditory activation in functional magnetic resonance imaging data across sessions and sites." In: Annual Meeting of the Cognitive Neuroscience Society. San Francisco, CA. (Poster PDF) (Abstract PDF)

Turner JA, Potkin SG, Glover G, McCarthy G, Gollub RL, Brown G, Dale A, Grethe JS, Friedman L, Keator DB, FIRST BIRN (2004) "Biomedical Informatics Research Network: Functional Imaging Research In Schizophrenia Testbed." Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. (PDF Abstract)

Zou KH, Greve DN, Wang M, Pieper SD, Warfield SK, White NS, Vangel MG, Kikinis R, Wells WM, FIRST BIRN (2004) "A Prospective Multi-Institutional Study of the Reproducibility of fMRI: A Preliminary Report from the Biomedical Informatics Research Network." Annual Meeting of the Organization for Human Brain Mapping, Budapest, Hungary. 2004. (PDF)

Zou KH, Pieper SD, Wang M, Warfield SK, Wells WM, Kikinis R, FIRST BIRN (2004) "An expectation-maximization algorithm for analyzing multi-center repeated function MR imaging data." In: Joint Statistical Meetings. American Statistical Association. Toronto, Ontario, Canada. (Presentation PDF) (Powerpoint)

Zou, K.H. Zou, Wang, M., Pieper, S.D., Kikinis, R. Kikinis, Wells, W.M. III, FIRST BIRN. (2004). Factors Impacting the Reproducibility of Functional MR Imaging: A Prospective Multi-Institutional Study by the Biomedical Informatics Research Network (BIRN). 12th Annual Meeting of the International Society for Magnetic Resonance Imaging (ISMRM),Kyoto, Japan.

2003

Potkin SG, Turner JA, Brown GG, Glover GH, Heckers S, Keator DB, Grethe JS, FIRST BIRN (2003) "Biomedical Informatics Research Network: Functional Imaging Research in Schizophrenia Test Bed". In: Society for Neuroscience. New Orleans, LA. (PPT Poster) (PDF Abstract)

Potkin SG, Andreasen N, Belger A, Brown G, Ford J, Glover G, Golub R, Heckers S, Lauriello J, Lieberman J, Lim KO, McCarley R, McCarthy G, Rosen B, Toga A, Turner J, Wible C (2003) "Multi-Site Brain FMRI Imaging Studies in Schizophrenia Using the BIRN Methodology: Cognitive Tasks and Clinical Correlates". In: A Workshop held at the International Congress on Schizophrenia Research. Denver CO.

Potkin SG, Andreasen N, Brown G, Glover G, Kikinis R, Lauriello J, Lieberman J, Lim K, McCarley R, McCarthy G, Rosen B, Toga A. (2002) Multi-site brain fMRI imaging studies in schizophrenia using the BIRN methodology and federated database approach. In: ACNP 41st Annual Meeting,, pp 252-253. San Juan, Puerto Rico.

Turner JA, Potkin SG, Brown GG, Glover GH, Greve D, Keator DB, McCarthy G, Grethe JS, Wible CG, Lim K, Toga AW, Andreasen NC, O'Leary D, FIRST BIRN. (2003) Biomedical Informatics Research Network: Integrating multi-site human functional imaging acquisition and analysis. In: Biomedical Information Science and Technology Initiative (BISTI) Symposium. Bethesda, MD. (PPT Poster) (PDF Abstract)

2002

Potkin SG, Andreasen N, Brown G, Glover G, Kikinis R, Lauriello J, Lieberman J, Lim K, McCarley R, McCarthy G, Rosen B, Toga A. (2002) Multi-site brain fMRI imaging studies in schizophrenia using the BIRN methodology and federated database approach. In: ACNP 41st Annual Meeting of the American College of Neuropsychopharmacology, pp 252-253. San Juan, Puerto Rico.

Potkin SG, Andreasen N, Belger A, Brown G, Ford J, Glover G, Golub R, Heckers S, Lauriello J, Lieberman J, Lim KO, McCarley R, McCarthy G, Rosen B, Toga A, Turner J, Wible C. (2003). Workshop on Multi-Site Brain FMRI Imaging Studies in Schizophrenia Using the BIRN Methodology: Cognitive Tasks and Clinical Correlates. International Congress on Schizophrenia Research Annual Meeting, Denver, CO.

Potkin, S.G.; Turner, J.A.; Brown, G.G.; Glover, G.H.; Heckers, S.; Keator, D.B.; Grethe, J.S.; FIRST BIRN. (2003). Biomedical Informatics Research Network: Functional Imaging Research in Schizophrenia Testbed. Annual Meeting of the Society for Neuroscience, New Orleans, LA.

2001

2000

Kim J, Fisher JW, Tsai A, Wible C, Willsky AS, Wells WM (2000) Incorporating Spatial Priors into an Information Theoretic Approach for fMRI Data Analysis. In: MICCAI 2000. Pittsburgh, Pennsylvania. (PDF Abstract)